Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0026800

Sequence Length

380 nt

GC Content

0.4842

GAUCAGAAUUCAGGCUAUAAAUGAAAUUGGAGCUGGACCAUUUAGUCAGUUCAUUAAAGCAAAAACUCGGCCAUUACCACCCUUGCCUCCUAGGCUAGAAUGUGCUGCUGCUGGUCCUCAGAGCCUGAAGCUAAAAUGGGGAGACAGUAACUCCAAGACACAUGCUGCUGAGGACAUUGUGUACACACUACAGCUGGAGGACAGAAACAAGAGGUUUAUUUCAAUCUACAGAGGACCCAGCCACACCUACAAGGUCCAGAGACUGACGGAAUUCACAUGCUACUCCUUCAGAAUCCAGGCAGCAAGCGAGGCUGGAGAAGGGCCCUUCUCAGAAACCUAUACCUUCAGCACAACCAAAAGUGUCCCCCCCACCAUCAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.50 kcal/mol

Ensemble Metrics

Free Energy: -95.69

Frequency: 0.0000

Diversity: 84.49

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...((..((((((((..................((((((..(((.((((.((((..(((........(((.............)))......)))..)))).))))))).))))))....)))))))).))....(((((((.(((((.............)))))))..((((((((((....)))....((((((((...........((((((...............(((((...............))))).((..((((.(((.............))).))))..))....((((.......))))((((((....))))))..))))))...)))))))).........))))))).))))))(......)

Thermodynamic Ensemble Prediction

(...,{..((((((((..........,,,,....((((((..(((.((((.((((..(((........(((.............)))......)))..)))).))))))).))))))}},,)))))))).}}....{((((,(.(((({.............})})))),.(((((({{((,...,},.,,.((((((((...........((((({...,,..,,,...,,{{{{(,,{,,....,.....)))}}.((..((((.(((.............))).))))..))..}||,{{..,...}))))((((((....))))))..}}}}))...)))))))).........})))))),))))})(......)