Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FNDC3B_0026900

Sequence Length

415 nt

GC Content

0.4747

GCUAGAAUGUGCUGCUGCUGGUCCUCAGAGCCUGAAGCUAAAAUGGGGAGACAGUAACUCCAAGACACAUGCUGCUGAGGACAUUGUGUACACACUACAGCUGGAGGACAGAAACAAGAGGUUUAUUUCAAUCUACAGAGGACCCAGCCACACCUACAAGGUCCAGAGACUGACGGAAUUCACAUGCUACUCCUUCAGAAUCCAGGCAGCAAGCGAGGCUGGAGAAGGGCCCUUCUCAGAAACCUAUACCUUCAGCACAACCAAAAGUGUCCCCCCCACCAUCAAAGCACCUCGAGUAACACAGUUAGAAGGAAAUUCAUGUGAAAUUUUAUGGGAGACGGUACCAUCAAUGAAAGGUGACCCUGUUAACUACAUUCUGCAGGUAUUGGUUGGAAGAGAAUCUGAGUACAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-94.60 kcal/mol

Ensemble Metrics

Free Energy: -102.57

Frequency: 0.0000

Diversity: 131.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((....(((.((.(.(((((((((((((((.((...((....(((((.........)))))))...)).))).))))))))...(((....)))..)))).).)).)))........((((((.(((((((((((...(((((...............))))).....(((.(((((((((((((....((((((..(((....(..((...(((((.((((((((....)))))).................((((........)))).................))))))).))..)...))).))))))....))))))).......(((..(((((...((((.......))))...)))))..))).))))))))))))..))))))))..)))))).)))........

Thermodynamic Ensemble Prediction

((,{({,{{(((((((((({(((((((((((.((...((....(((((.........)))))))...)).))).))))))))..,(((....}}}.,}},((({{(({.,,......,{{{{{{...{{{.|{{.,...(((((..{............))))).||}},|||.{||,|}|.........)))}))))..,,},}})))),,))|,(({({{{({{(,...}|||||.,.,,||..,,{||,|{({{{........}|}|,.,..............,,{|{,,.,{,,{...}}}},.}}}...,,|,}})),.......|}|}.|||(({{{(,{,.......)))),}}}|||,..,,}}},,)))}}}||,}||}||||,.,,...)))}},}....,}..