Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FOXO3_0000400

Sequence Length

250 nt

GC Content

0.3920

CAUCAAAAGGAUGGGCAAAUGUAGAUGGAGGCUGAGUGAGUGUAUCAUGUUUGCAUAGCUGUCCAGUGCCUGUCAGUAGGGGUACUUAGGAACUAUGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGUGGAAAGAGGAGGGAAUCCUAGGUGUCUACAUUCACGACACUUUACAACAGCAAAGUCACUGUGGCGAGGGGAGAGACCUGGAAGCACCUCUGCCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-50.50 kcal/mol

Ensemble Metrics

Free Energy: -54.26

Frequency: 0.0022

Diversity: 30.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.....)))).((((((((.((((.(..(.....)..).))))))))))))((((...((((((((((........)))))))..))).))))........................................................(((..(((((...(..(((.((((.(((...(((.(.(((((((........)))))....)).).)))...))).)))))))..).))))).)))..

Thermodynamic Ensemble Prediction

((((.....)))).((((((((.((((.{.{({.....}}).)))))))))))){(((...((((((((((........)))))))..))).)))}........................................................{((..(((((.,,{..(((.((((.(((.,.(((.(.(((((((.,....,.))))}...,)).).))).,.))).)))))))..).))))).))}..