Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FOXO3_0001200

Sequence Length

250 nt

GC Content

0.3840

UACUUCAACUCUGCUAAGAAGUUGCUGGGAAGUGGCAAAUUUGAUGUGGGGCAUGGCUUGGAGCUAGCCUUUAACUCUCUGCAGAUCAUUUUGAGCUUGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUCCAGCUCAAAAUGCCAGUAGUGCCAGGGCUGAGAAACCUACCUGAAGCCUCACAGUGGCAUGGUCCGUUUCAGAAGUAUGUGGGAGAGAAAAUUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.31 kcal/mol

Ensemble Metrics

Free Energy: -54.15

Frequency: 0.0004

Diversity: 62.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((((((((.(((...(.((.((((((.(.(((........((((((((..((...((..((((((((..(((..(((.....(((((((((((.........................................................))))))))))).))).)))...)))))).))...))..))....))))))))........)))).)))))))).)...))).))))....))))).

Thermodynamic Ensemble Prediction

...(((((((((.(((...,.((,((({{{.{,(((........{(((((((.{(({{.,,,,|||||||{..,{|,.{{(|,,..(((((((((((.{,......................................................))))))))))),||}|}}||..}|||||.||...,,..,),...)))))))).,}},.,.)))}.))))))}).}...))).))))....))))}.