Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FOXO3_0001400

Sequence Length

378 nt

GC Content

0.4683

UACUUCAACUCUGCUAAGAAGUUGCUGGGAAGUGGCAAAUUUGAUGUGGGGCAUGGCUUGGAGCUAGCCUUUAACUCUCUGCAGAUCAUUUUGAGCUUGCUUUGGAGAUGCAAAACCACCGUACCAUGGCUCCUGUGGAUUGGGUCUGUUUGGGAGAAGCUUUGGUUUUCCAAGCUCCACCUGGAUUAGAUAGAGCACAUCUUUGGCCCUGGACUGAUCUGGGAUCCCCAGUUCUGUCUCCCAGGGCCUGAUGUAGAUCUGGCCUUCCUCUGGAGUGGAUGUGGAGCCUUGAUGCCACUGACUCAUCUGUAUUACUUGUUGCCUAAAACUCAGAACUAAAAGAGAUCUUAAAGAUCAUCUAACUACCUUAUUUUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-109.60 kcal/mol

Ensemble Metrics

Free Energy: -117.71

Frequency: 0.0000

Diversity: 122.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((...........)))).))(((.(((((((((........(((((((.(((((...))))))))......(((((((((.(((...)))..))))...))))).......)))).....((.((((((...((((...))))((((((((((........))))))))))((((((((((..((.((((.((((((...((((((((((.((.(((((...))))).)).))...)))))))).))))).).))))..))...))))).)))))...)))))).)).)))))))......((((.....................))))......((((((((...))))).)))............)).)))

Thermodynamic Ensemble Prediction

{{{{{{....,,,,..,}}||||}((({(,(((((((..,,{{{{,((((((.{((((,,,||}}||||,....{((((,(((({((,..,|||.,|}||..,||}}},,.....,,,,,||.|||.|||{{{.,,|||...}))))||,,|||||,,,,...|})}})))))))|{{{||||{|,,||,{(((.,(((((...((((((((((.((.(((((...))))).)).)),..}))))))).))))).,.)))},,}|,|,}}})).))))).,,))}))).,,.})))))}..},,,,{,{,,......,||,,....,,},)))}......((((((((...))))).)))...........,}},)))