Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_FOXO3_0003100

Sequence Length

224 nt

GC Content

0.4643

AAUAAAGGUAUGAUCCAGCCCCAUGGACCAAGGCAGCAGGAGGAGAGUUCCCAGGGUUUUUCUAAGAGAUCUAAAGCUACUAAAUACUGUCAGAAGAAAGAAGAAAAUUUAUGUGGGAGAGCUAAGUGGAAAGAGGAGGGAAUCCUAGGUGUCUACAUUCACGACACUUUACAACAGCAAAGUCACUGUGGCGAGGGGAGAGACCUGGAAGCACCUCUGCCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.20 kcal/mol

Ensemble Metrics

Free Energy: -50.45

Frequency: 0.0002

Diversity: 73.70

Structure Visualization

Structure Prediction

MFE Structure Prediction

..........((.((((......)))).)).(((((.(((......((((((....((((((((..((.(((....(((((((((....((........)).....))))).)))).))).))...))))))))...)))))).((((((.(((...(((.(.(((((((........)))))....)).).)))...))).)))))).....))))))))...

Thermodynamic Ensemble Prediction

......,,,.{{.((((......)))).)}.((({(.((({{{...{(({((,,,,(((((((,...,.,({....(((((,{,{.((.((,.,..,,,,,.....,))),,,))).))}.,,.,,)))},}}|,,,}}},,)}||(((({((,...,,,.,}||||||,.,.,,,|.,,,},..,))).}.}}}.},))),)))))).,,}.))))))))...