Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GBAS_0003900

Sequence Length

179 nt

GC Content

0.5140

GGCUCGUGCAAUCCGCUUCAGACAGGAUGGUAACGAAGCCGUCGGAGGAUUCUUCUCUCAGAUUGGGCAGCUGUACAUGGUGCACCAUCUUUGGGCUUACAGGGAUCUUCAGACCAGGGAAGACAUACGGAAUGCAGCAUGGCACAAACAUGGCUGGGAGGAAUUGGUAUAUUACACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.10 kcal/mol

Ensemble Metrics

Free Energy: -48.34

Frequency: 0.0010

Diversity: 35.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((.((((..........)))).)).))).))))(((.((((((((((..((((((.((((((.(.......).))).)))..)))))).....)))))))))).)))..........((((.((.(.(((((((.......))).)))).).....)).)))).........

Thermodynamic Ensemble Prediction

(((((((((.((((..........)))).)),})),,)))(((.(((((((((({{({{(((.((((((.(.......).))).)))}})}}))).....)))))))))).)))..........{{{{.{,.{.(((((((.......)))}}))).}.....}}.}}},..,.,.,..