Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GCN1L1_0007400

Sequence Length

250 nt

GC Content

0.4280

UUCAUGAAGGGACCUUGGUACACGCUGUCUCAGUCCUGGCUCUCUGGUGUAACCGAUUCACUAUGGAAGUGCCCAAGAAGCUCACUGAAUGGUUCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGGCAACAUGUACUCCCUGACAGACCAGAAGGACUUGGCUCCGUACCUGCCCAGCGUGACGCCUGGCCUGAAAGCAUCGCUUUUGGACCCUGUGCCUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.80 kcal/mol

Ensemble Metrics

Free Energy: -50.58

Frequency: 0.0022

Diversity: 67.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((......)))(...((((((.(((((.(((((...((((((.(((.(((.(((........)))...)))))))).)))).))))))))))..........................................................(((..(((((..((((((......)))..)))...(((.........)))..)))))..))).((.((((((((...)))))))).)).))))))...)

Thermodynamic Ensemble Prediction

(((,,,..,||}(...((((({.({{((,{{(((,,,((({,({(((,({(,((,.{,,,...}}}...}}}))}}),}))).}))))))))),.........................................................(({..{{{({..,,,{{{....,,))).,)))}}.|||...}},,,.})),.})))),.)|}.((,((((((((...)))))))).}}.,))))).,.)