Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GCN1L1_0010400

Sequence Length

250 nt

GC Content

0.4440

GAUAGCUGUGCCCCUCUGCUCCGAUACCUGUCCCACUCAGAAUUUAAGGAUCUGAUACUGCCCACCAUACAGAAGUCCUUACUGAGGAGUCCAGAGAAUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCUGAUGGGCUCUCUGGCCAAGCACCUGGACAAGAGUGACCCCAAAGUGAAGCCCAUUGUUGCCAAGCUCAUCGCUGCCCUCUCCACCCCCUCCCAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.00 kcal/mol

Ensemble Metrics

Free Energy: -46.89

Frequency: 0.0018

Diversity: 21.99

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((..((..((((((((((((....)))....((((....((((((((((...............))))..))))))))))))))..))))).........................................................((((((((((.(((.....(((((.....)).)))...))).))...))))))))...))..)))).))).((((..................))))

Thermodynamic Ensemble Prediction

(((((((,.((..((((((((((({....}}}....((((....((((((((((.{,.,,.....,,},)))}..))))))))))))))..})))).........................................................(((((((((,(({{.....(((((.....)).)))...}},.}).},)))))))),..)),.)))).))).((((..................))))