Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GCN1L1_0010700

Sequence Length

252 nt

GC Content

0.5437

GUGAAGCCACUCUUUCAGUUUUUUGUCCCUGAUGCCCUCAAUGACCGACACCCAGAUGUCCGGAAGUGCAUGUUGGAUGCAGCCCUCGCAACGCUCAACACUCAUGGGAAGGAGAACGUCAACUCGCUGUUGCCAGUAUUCGAGGAGUUCCUGAAGAACGCGCCCAAUGAUGCCAGCUAUGAUGCUGUGCGACAGAGUGUGGUGGUCCUGAUGGGCUCUCUGGCCAAGCACCUGGACAAGAGUGACCCCAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.50 kcal/mol

Ensemble Metrics

Free Energy: -71.30

Frequency: 0.0000

Diversity: 87.96

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((..(.(((((((((((...((((.((..((.(((((((..((((.((.(((((((((..((...(((..((((....))))....)))...))..))).)).)))).(((((..(.((.(((.((....)).)))....)).)..)))))......(((((....((.(((((((......)))).))).))..))))))))))).))).))))..)).)).))))...)))))..)))))).)..))..

Thermodynamic Ensemble Prediction

.,{..{.(((((((((((...((((.((..((.(((((((..(((({.(((.,...((({,{,..,(((,((((({,|{|}{|{{{{|,,,,{{|{{|||.,|.|{{{..{{{{..,.}}..||},{||||},,})}.|||}}||.{|||,,...}}}}||||}},.|,.|||((((......)))).)))}))},)}))),})))).))).)))),,}}.)).)))).,.))))}.,)))))).}..},..