Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0003000

Sequence Length

289 nt

GC Content

0.4637

CGUUAAAAGGAUCUGAACAAAGUCUGCUCAAAUCUCCUGCUGUGAACCAGCAGAAUUUUUGAACAGAGAUACUGUAGCUAAGUGCAACAAGGUGUCCUGAAUUGGAGACUGGCACAGAACAAGGAUGUUGUUGGAAAAACUGAUGAAAUCUGAAUAAACUCUGAAGUAUAGAGACUGUCUCGCUCUGUCACCCAGGCUAGAGUGCAGUGGUGCUAUCGUAACUCACUGGAGCCCUGAUCUAGGCUCAAACCAUCCUCCCACCUCAGCCUCCCAAGUAGCUGGGACUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-71.30 kcal/mol

Ensemble Metrics

Free Energy: -76.95

Frequency: 0.0001

Diversity: 65.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((....((((((((.....(((((.((((((....((((((.....))))))....))))).(((.((((((((.((.....)).))..)))))))))....).)))))....))))....((((.(((((((.....))))))).)))).......(((((.....))))).......(((((((((.....))).))))))(((((((((....)).)).)))))(((((........)))))......))))...))((.((..(((((......))))))).))

Thermodynamic Ensemble Prediction

.{{....{(({({({.....{{((({,(((((..,.((((((.....)))))).,..))))).|||,{{{{((((.((.....)).}},.|||}|||}}....)})}))),},,)}},....((((.(((((((.....))))))}.}))},......(((({.....}))))..,,},.{((((((((.....))).))))))(((((((((....))},).)))))(((((........)))))....,)))))...}}{{.{{,.(((((......)))))},.})