Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0004300

Sequence Length

250 nt

GC Content

0.3880

AGAUACUGUAGCUAAGUGCAACAAGGUGUCCUGAAUUGGAGACUGGCACAGAACAAGGAUGUUGUUGGAAAAACUGAUGAAAUCUGAAUAAACUCUGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCUGGAGUGCAAUGGUGUGGUCUCGGCUCACUGCAACCUAUGCCUCCCGGGUUCAAGUGAAUCUCCUGCCUCAGUCUCCCGAGUAGUUGGGACUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.60 kcal/mol

Ensemble Metrics

Free Energy: -53.18

Frequency: 0.0030

Diversity: 49.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((((.(((....(((...))).....((((((((...((((....((((.(((((((.....))))))).))))........)))).....................................................((((.((((.(((..((((((((........))))).)))..))))))).((((((....))))))...))))))))))))...))).))))..))))))

Thermodynamic Ensemble Prediction

.,,,,((((,((....,||.,}..||}}|}({.....(((((((({|,((((....((((.(((((((.....))))))).))))........))}).....................................................,{{{.((((.(((..((((((((........)))))}}))..))))))).((((((....))))))..,)))}})))))}|,,,|||,}}}},}))))))