Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0006100

Sequence Length

380 nt

GC Content

0.4605

AGACCACGUCUCCACCUCCUGGGCUCCAACGAUUCUCCCAUCUUGGCCUCCCAAAGCGCUGGAUUUACAGGUUUCUUCACAUAUAAAAAUCUAUUGUAAAAAUACGGAAAAGAAUGGCAGCGGAAACGCAGACACUGAACUUUGGGCCUGAAUGGCUCCGAGCUCUGUCCAGUGGUGGGAGUAUUACAUCCCCUCCUCUUUCUCCAGCAUUGCCGAAGUAUAAAUUAGCAGAUUAUCGUUACGGCAGAGAAGAAAUGUUAGCACUUUUCCUUAAAGACAACAAGAUACCUUCAGACCUUCUGGAUAAAGAAUUUCUGCCUAUCCUCCAGGAGGAACCCCUUCCACCAUUGGCUCUGGUACCCUUUACAGAAGAAGAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86.80 kcal/mol

Ensemble Metrics

Free Energy: -94.65

Frequency: 0.0000

Diversity: 108.72

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((...))))(..(((((((((((((((.(((......)))))))........)))...((((...((((.(((((...........((((.((((.....((.(((((((..((((((((....))).((((..((.(((.(((((.....))))).))).)))))).((.((.((((........))))..)).))(((((......(((((((..((((.........))))..)).))))))))))....)))))...))))))).))...))))..))))...((((((...))))))..)))))..))))...)))).)))))))).(((....(((....)))....)))...((((......))))....)

Thermodynamic Ensemble Prediction

(((({..||}|(,,{{{,.((((..((((.(((......)))))))...)))).||,,,||}}....}||||||(({...........,{{{.{{{{,....,|.(((((((..(((({(((....))).{{((..((.(((.(((((.....))))).))).))}))},{{,((.((((,.......}})),.}}{{{(((((......(((((((..((((,{{....}}))))..)).))))))))))),..})))}...)))))))..,...,,,,.,,||,,..,.{{{{..((((,,,...}}}}..)))}..,,},.,}})))))).....,,}|||,,..))),|(((.....,{{{.,,)},)},}...,)