Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0014000

Sequence Length

250 nt

GC Content

0.2160

AUGAGAAGACAAUUUUACAAGUAUAAUACUGUCAUUAUAAAUAAAAUUAUGAUGACAUAAUAAAAGAUUUUGACACAUGGAAGAAGGAUAUAACAAUGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAAAAAAUAUAUUAAUUCCUUCUUUGUUUUAUUAGUACCAAAUACUUCAACACAAGUUCAGACACAGCAUUAGAAACACUGACCUUCAGAACUAGGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-20.17 kcal/mol

Ensemble Metrics

Free Energy: -25.65

Frequency: 0.0001

Diversity: 44.85

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((.((((.......(((.((((.(((..(((((((((((......)))))))))))......................(((((((((..............................................................................)))))))))))).)))).))).......))))(((....)))..................))((..(((........)))..))

Thermodynamic Ensemble Prediction

.({,{{,.....}}}}.,.{(({...}}}|((((((((((......))))))))))}...,,........,,.......{((((((((..............................................................................))))))))),}},},,,|||,.....,,|||,..,...{||{{.{{...,,.....,.....||}.,{{,,.,,,,,,)},,))