Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0015800

Sequence Length

417 nt

GC Content

0.5396

GGAGACCAAAUUUUGAGGAAGGUGGACCAACAUCAGUAGGGAGAAAGCAUGAAUUUAUACGCUCAGAAAGUGAAAAUUGGCGCAUCUUUAGAGAGGAACAAAAUGGAGAAGAUGAAGAUGGAGGUUGGCGACUAGCUGGAUCAAGGAGGGAUGGAGAGAGGUGGCGACCUCACAGUCCUGGAAGAGGAGGCUGCAAAAUGGGCCCGGGAAGAAGAAGAAGCCCAGCGUCGAUUAGAGGAGAACCGGCUGCGGAUGGAAGAGGAGGCAGCCAGACUCCGGCAUGAGGAAGAAGAACGGAAGAGAAAGGAGCUGGAGGUCCAGCGGCAGAAGGAGUUAAUGCGCCAGAGGCAGCAGCAGCAAGAGGCUCUCCGGAGGUUGCAGCAGCAGCAGCAGCAACAACAGCUGGCGCAGAUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-106.70 kcal/mol

Ensemble Metrics

Free Energy: -114.92

Frequency: 0.0000

Diversity: 98.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...(((.............)))...)(..((((.........................((((.....))))..((((((((((((((((........((...)).......))))))).(((((((.(..((..((..(((.......)))..))..))..).)))))))....((((.....))))((((........)))).(((............))).)))))))))...((....))((((((..............)))))).((((((..(.((.........................(((((....)))))..)))..))))))..((((((((..((.((.((.((...((.(((....))).))...)).)).)).))...........))))))))))))..)

Thermodynamic Ensemble Prediction

(...{((...,,,.......}}),..)(..((((.,,..........,.....,,,.,.{{|{,,...,,))..((((((((((((((((........{,...,}.......))))))),(((((((.(,.((..((..(((.......)))..))..)).}).))))))).{{{((((.....}))}||||}.....{{|||,.,,,...........})))})))))))))...((....))((((((...,..........)))))).{,((((,.{.,............|.............(((((....)))))..),,..}}}}}}..((((((((.,({.({,{{.||....,,|||,},.},,{||{{.||.,}.}}.)),))..,..,..)))))))}))))..)