Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0020800

Sequence Length

256 nt

GC Content

0.4609

ACAACAAUAUGCACAGGUUUUGGCCCAACAGCAGAAAGCAGCACUGUCUUCCCAGCAGCAGCAGCAGUUGGCACUUCUUCUUCAACAGUUUCAGACCUUGAAGAUGAGGACUCUGUGUGGGGGAUGAACCACAGUACACUCCAUUCAGUAUUUCAGACCAAUCAAAGCAACAACCAACAAUCCAAUUUUGAGGCUGUGCAGAGUGGCAAGAAGAAGAAAAAGCAGAAGAUGGUCCGAGCAGAUCCCAGUUUAUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.10 kcal/mol

Ensemble Metrics

Free Energy: -55.42

Frequency: 0.0009

Diversity: 65.99

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.......(((...(.((((.((......)).)))).).(.((((((((((((((.((....)).)))))...(((((((((........((((((((......))))..))))(((((........))))).......((((((.(((...(((.((..((((((..................)))))))))))))).))))))...)))))))))......))))))))).)..))).......))((...))

Thermodynamic Ensemble Prediction

((.......(((...({((({.((......}}.,}}},).{.((((((((((((((.((....)).)))))...(((((((((..,,,.,,((({((((,....,))))..}|||{((((,,......}}}),.....,}||||{|,|{{...{{(.((..{({{{{..................,))))))))))))).))})))...))))))))}......))))))))).,..))).......)){|...,)