Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0021300

Sequence Length

494 nt

GC Content

0.5142

UAACUAGGUCUGUGUCCGUGCCAGAUACUGGCUCUAUCUGGGAGCUUCAGCCAACAGCUUCACAGCCUACAGUUUGGGAAGGUGGUAGUGUAUGGGAUCUUCCUCUGGACACCACGACACCAGGCCCUGCCCUGGAACAGCUUCAGCAGCUAGAGAAGGCCAAAGCUGCAAAGCUAGAGCAAGAGAGAAGAGAGGCAGAAAUGAGGGCAAAACGGGAAGAGGAAGAGCGAAAGAGGCAGGAAGAACUCCGAAGACAACAGGAGGAAAUUCUUCGGCGACAGCAGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAACUUGCCCGAAGGAAACAGGAAGAGGCUCUGCGUCGCCAGCGGGAGCAAGAAAUUGCAUUAAGGCGACAGCGAGAAGAGGAAGAAAGACAGCAGCAAGAAGAAGCUCUUAGAAGACUGGAAGAGAGGAGAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAAUUGUUACGCAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-130.90 kcal/mol

Ensemble Metrics

Free Energy: -139.05

Frequency: 0.0000

Diversity: 67.31

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....(((((.((((((((((...)))))(((.((((((((((((.(((.....((((.(.((((...((((((....(((((.((.((.((((...)))).)).)))))))....))))))((((((((.(....(((((.((((((............))))))...((....))...........))))).....).))))))....))..................)))).)))))..((((..........))))....((((((.((....))..))))))..........((((((...........)))))).................)))(((((((((((....((.((((....)))).))..)))))).)).))).........................)))))))))))))))((.......)).....................))))).))))).......))))(.......)

Thermodynamic Ensemble Prediction

((((....(((((.((((((((((...)))))(((.((((((((((((.{({....,((((.{.((((...{(((((....(((((.((.((.((({...}))).)).)))))))....)))))|((((((((.,....(((((.((((((........,...))))))...((....))...........))))).,...}.))))))....})}..........,|....,}))).,},,,..((((..........))))....((((((.((....))..))))))..........((((((...........)))))),................}}||({((((((((....{(.((((....)))).))..)))))).)),,}.................,........)))))))))))))))((........,.....................))))).))))).......))))(.......)