Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0022600

Sequence Length

396 nt

GC Content

0.5530

GAAGAGGCUCUGCGUCGCCAGCGGGAGCAAGAAAUUGCAUUAAGGCGACAGCGAGAAGAGGAAGAAAGACAGCAGCAAGAAGAAGCUCUUAGAAGACUGGAAGAGAGGAGAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAAUUGUUACGCAAACAGGAAGAGGAGGCUGCAAAAUGGGCCCGGGAAGAAGAAGAAGCCCAGCGUCGAUUAGAGGAGAACCGGCUGCGGAUGGAAGAGGAGGCAGCCAGACUCCGGCAUGAGGAAGAAGAACGGAAGAGAAAGGAGCUGGAGGUCCAGCGGCAGAAGGAGUUAAUGCGCCAGAGGCAGCAGCAGCAAGAGGCUCUCCGGAGGUUGCAGCAGCAGCAGCAGCAACAACAGCUGGCGCAGAUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-98.30 kcal/mol

Ensemble Metrics

Free Energy: -105.07

Frequency: 0.0000

Diversity: 68.72

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((((((((((((....((.((((....)))).))..)))))).))...................(((((.........(((((......((.....)).....))))).............(((..(((((......))))).)))...............)))))..(((.((((.(((............))).).))).)))...((....))((((((..............))))))....((((................)))).......(..(((((....)))))..).......(((..((((((...))).)))..))).)))).)))))(.....((((..((((................))))..)))).....)

Thermodynamic Ensemble Prediction

(,,(((.((((((((((((....{(.((((....)))).))..)))))).}}...................(((((.........(((((......{{.....,,,,.....................(((..(((((......))))).)))...............)))))...,({(((..,,,...........}))),,,,||.,,,.,,{|....|}((((((...,..........)))))).,.{((({...,............},,,.......,..(((((....)))))..}....,,.{{|..((((((...))).)))..})).)))).)))))(.....((((..((((.{,.............))))..)))).....)