Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0022900

Sequence Length

311 nt

GC Content

0.5595

CUCUUAGAAGACUGGAAGAGAGGAGAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAAUUGUUACGCAAACAGGAAGAGGAGGCUGCAAAAUGGGCCCGGGAAGAAGAAGAAGCCCAGCGUCGAUUAGAGGAGAACCGGCUGCGGAUGGAAGAGGAGGCAGCCAGACUCCGGCAUGAGGAAGAAGAACGGAAGAGAAAGGAGCUGGAGGUCCAGCGGCAGAAGGAGUUAAUGCGCCAGAGGCAGCAGCAGCAAGAGGCUCUCCGGAGGUUGCAGCAGCAGCAGCAGCAACAACAGCUGGCGCAGAUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-76.00 kcal/mol

Ensemble Metrics

Free Energy: -80.74

Frequency: 0.0005

Diversity: 58.37

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(..(.(((((...........................(((..(((((......))))).)))............(.((((........)))))(((............)))..(.((.....)).)......((((((..............))))))...(((((((............................))))))).))))))..)...)))))((..((((((((..((.((.((.((...((.(((....))).))...)).)).)).))...........)))))))).....))

Thermodynamic Ensemble Prediction

(((((.{..{.(((((...........................(((..(((((......))))).)))............,.{(((,,....,,|||},{{{...........,))),,{.||.....},,|....}}((((((...,..........))))))...(((((((............................))))))).))))))..)...)))))((..((((((((..(,.({,((.|{.....,|||,,,.}}}{||{{.||.,,.}}.)),))..,..,..)))))))).....))