Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0023400

Sequence Length

570 nt

GC Content

0.5509

GAAGAGGAGGCUGCAAAAUGGGCCCGGGAAGAAGAAGAAGCCCAGCGUCGAUUAGAGGAGAACCGGCUGCGGAUGGAAGAGGAGGCAGCCAGACUCCGGCAUGAGGAAGAAGAACGGAAGAGAAAGGAGCUGGAGGUCCAGCGGCAGAAGGAGUUAAUGCGCCAGAGGCAGCAGCAGCAAGAGGCUCUCCGGAGGUUGCAGCAGCAGCAGCAGCAACAACAGCUGGCGCAGAUGAAGCUUCCUUCUUCUUCAACGUGGGGCCAGCAGUCCAAUACAACAGCAUGUCAGUCCCAGGCCACGCUGUCGUUGGCUGAAAUCCAAAAACUAGAGGAAGAACGAGAACGGCAGCUUCGAGAAGAGCAAAGGCGCCAGCAGAGGGAGUUGAUGAAAGCUCUUCAGCAGCAGCAGCAACAGCAACAGCAGAAACUCUCAGGUUGGGGGAAUGUCAGCAAACCUUCAGGUACCACGAAAUCUCUUCUGGAGAUCCAGCAGGAAGAGGCCAGGCAAAUGCAAAAGCAGCAGCAGCAGCAGCAGCAACACCAGCAACCAAACAGAGCUCGUAACAAUACG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-164.20 kcal/mol

Ensemble Metrics

Free Energy: -175.49

Frequency: 0.0000

Diversity: 157.28

Structure Visualization

Structure Prediction

MFE Structure Prediction

........((((((....(((.((((.(..((((((((((.....(.((.....)).)......((((((..............))))))....((((................)))).......(..(((((....)))))..).((((.......((((((((..((.((.((.((...((.(((....))).))...)).)).)).))...........)))))))).......))))))))))))))..).)))).)))))))))..........((((....(((...((((..(((((((((........(((..........)))........)))))))))(((.(((((((....((.(((....(((((.(((((((....(.(((((((...((.((.....((....)).....))))...))))))))..)))))))...))))).))).)).......))))))).))).(((....)))...)))).)))..))))....((.((.((....)).)).))......(((...........)))((((....))))

Thermodynamic Ensemble Prediction

,.....{.((((((....(((.((((.(..(((((((((({{,.,{.((.....,.(({{..|,((((((...,..........)))))).,.}|||,.,.|,..,....,...,||,.......,..(((((....)))))..}.,..{,,{{{..((((((((..(,.({,((.|{....,,|||,,,.}}}{||{{.||.,,.}}.)),))..,..,..))))))))..,,..}))))))))))))))..).)))).)))))))))}.........(({(....{{{,,.((((..(((((((((..,.....(((..........))).....,..))))))))){((.(((((((....{(.(((.,,.(((((.((({{{,...||||||||||.{,.|..||....||....)).....|||||..}})))})}..,}}}}})...))))}.))).)).......))))))).))}.(((....)))...)))).))}..}}))....{{.((.((....)).)).))......,{{...........)))((((....))))