Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GIGYF2_0023700

Sequence Length

379 nt

GC Content

0.4802

UAAAUCUGUAGGUGUGUCUAACCGGCAGAAUAAGAAAGUAGAAGAAGAAGAAAAGUUGCUGAAGCUCUUUCAGGGAGUAAAUAAAGCCCAAGAUGGAUUUACGCAGUGGUGUGAACAGAUGCUUCAUGCCCUUAAUACGGCAAAUAACUUGGAUGUUCCCACAUUUGUUUCUUUCCUGAAAGAAGUAGAAUCUCCUUAUGAGGUCCAUGAUUAUAUCAGGGCCUAUUUAGGAGAUACUUCUGAGGCCAAGGAGUUUGCCAAGCAGUUCCUUGAGCGCCGUGCCAAACAGAAAGCCAACCAGCAGCGUCAGCAGCAGCAGCUGCCACAGCAGCAGCAGCAGCAGCCGCCACAGCAGCCGCCACAGCAGCCACAACAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-108.10 kcal/mol

Ensemble Metrics

Free Energy: -116.05

Frequency: 0.0000

Diversity: 83.56

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...(((((.(((.......))).))))).........................((((((((.((((((((((((((.(((((((..(((...))).(((((((....)))))))..((....)).((((........)))).......(((......)))..))))))).))))))))))))......(((((((....((((((.((((...))))))))))....)))))))..(((((.(((((((((..((((...)))).))))))........)))...))))).((......)).)).)))))))).((.(((((....((.((.((....)).)).))....))))).))....)(.((.......)).)

Thermodynamic Ensemble Prediction

,...{((((.(((,,,....}}}.}}}}}.........................((((((((.((((((((((((((.(((((({..(((,,.,}}.{((((((....))))))}..,,....}}.((((........)))).....,,|||.,,,..}}},.))))))).)))))))))))|{{{{,.(((((((.,..((((((.((((...))))))))))..,.))))))),)}|||{.{((((((((,.((((...)))),)))))).}},,,,,,,....},,...({......))})).)))))))).((.(((((....||})}.||.|,.||.||.||....)).)).))....}|.|,,.,....)).}