Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GRIN2B_0000300

Sequence Length

461 nt

GC Content

0.4121

GUUUUGGAAGGAAGAAAGCAUGAAUGAGUCAUAUAGCCAUCCGGCAGGAAGAGUGAGAACAAAAAUGUCGGAGACACCAAAAAUAUAGGAGACAUGCUAGGGGGCAUAAAGGAAUUAUUUGAGUUUUUAUGAUUAUGAGUUUAAAGAAAUUUGUUUUCUUCAGUCACCUUCAGCUGCUUAAACAGGGUGGCAAGUUAGAUUGGAACAGGGUUGGGGUAUAACCAGGUGAAUAUAAUGAAAGCAAGAGAUGUGGAGUCAAGGGCAACUGCAGUGUGUUAACUAUAAUGUUUGGUCAUGGAAUCUAAGCUGGGUGUAGAGGAAAGUGAGGAUUUUUAGGGAAGGAGGAACAAUGAAGCAUAUUAGAGGCAGAGGAUUGAGAUUCAAGCUGGGAUCACUCAGUUAGUGAGUCAGAAGCAAUAACGUAGAAAUUAGGAGGUGGGUUGGAGAGGUGGAUGCUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-89.30 kcal/mol

Ensemble Metrics

Free Energy: -98.78

Frequency: 0.0000

Diversity: 103.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((....))))..((((((..((...((..((.(((.(((((((......((....)).....)))))))....(((((..(((((..((((((((.((..((....(((((((.....))))))).......(((.((((......(((((((((.....((((((...(((((((.....))))))).................(((((.....))))))))))).......))))))))).....)))).)))...))..))..))))))))..)))))...)))))((((....((((.((...)).)))).....)))).((((((((.(..........((((...((.........)).....)))).(((((((((((((....)))))))..))))))...........).))))))))....)))..))..))...))..))))))...

Thermodynamic Ensemble Prediction

.((((....}))}..((((((..{(...((...{,(((.(((((((......((....)).....)))))))...((((({..(((((..((((((((.({.,{(,{,,{,{{{{{.....}|}}}}}}}}..,.(((.((((......{((((((((,{,,,((((((...(((((((.....))))))).,|.,.,,,},,}||..(((((.....)))))}}))}}.......))))))))}.....)))).))}...}}..))..))))))))..))))}.}.}))))|{.,,{{{(((..(((...,....,....}))..}})))}|,,.,..........|,,,...{{.........})......||..(((((((((((((....)))))))..))))))..,..|.....|.||,,,,,}....})),}})}})}...))..))))))...