Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GRIN2B_0003100

Sequence Length

438 nt

GC Content

0.4817

GUGGGGAAGUGGAAAGACAAGUCCCUGCAGAUGAAGUACUAUGUGUGGCCCCGAAUGUGUCCAGAGACUGAAGAGCAGGAGGAUGACCAUCUGAGCAUUGUGACCCUGGAGGAGGCACCAUUUGUCAUUGUGGAAAGUGUGGACCCUCUGAGUGGAACCUGCAUGAGGAACACAGUCCCCUGCCAAAAACGCAUAGUCACUGAGAAUAAAACAGACGAGGAGCCGGGUUACAUCAAAAAAUGCUGCAAGGGGUUCUGUAUUGACAUCCUUAAGAAAAUUUCUAAAUCUGUGAAGUUCACCUAUGACCUUUACCUGGUUACCAAUGGCAAGCAUGGGAAGAAAAUCAAUGGAACCUGGAAUGGUAUGAUUGGAGAGGUGGUCAUGAAGAGGGCCUACAUGGCAGUGGGCUCACUCACCAUCAAUGAGGAACGAUCGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-110.70 kcal/mol

Ensemble Metrics

Free Energy: -120.80

Frequency: 0.0000

Diversity: 144.28

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((..((......))..)))))(((.(((......))).))).))(((((.(((.((((..((.((..(((.......((((((((((.(((((((((((((.......(((.((..(((((..(((((..(.((((...((((((((......)).)).))))..)))).)..))(((.......))).................)))))))))).))))))))))).......)))))...((((((((......)).)))))).((((...)))).((((.((((((.(((....))).))))))..)))).(((.((.....))))).........((((.(.(((......))).).))))...)))))))))).....((((((((......)))))))).)))..))))..)).)).))).)))).)

Thermodynamic Ensemble Prediction

(((((((.,({.....,||..||||{((((.,........{{(({((((((((..(((,(((((.(((((..,.(((((.((((..,,.(((.{(((..((,.(((({({((.{,{,(((({{.{(,...}}}.,}}})})...))))}.}}.}}.}}.))).}.)))....,.))))))))),.........})))).))).),.....}))..)).)).)))),,,))))}......,,.)))),|||||||{},,.,},)},))))}.{((,...})))..||({,(((,({((,.,,.{{{{(.,,||,,}}}}.((.{((.....)))}),.......,((((.(.(((......))).).)))),..,||||||}}}|.,{.((((((((......)))))))).}))})}}}}..}},})}))..))),})