Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_GRIN2B_0004800

Sequence Length

250 nt

GC Content

0.4240

GGAGUCGACGAGUUGAAGAUGAAGCCCAGAGCGGAGUGCUGUUCUCCCAAGUUCUGGUUGGUGUUGGCCGUCCUGGCCGUGUCAGGCAGCAGAGCUCGUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGUCUAGAGGAGUCUGGAAACUAUUGAGUGGUCAGGAUGUAGAUGAGAGUUUGGCCAGGUGAUCACUCUUGAGCAAAAGAAGCUUCUCCAGGAAGUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.80 kcal/mol

Ensemble Metrics

Free Energy: -59.39

Frequency: 0.0006

Diversity: 58.23

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((...(((..((.((((((((((((((((.......))))...)))))))..(((....)))(.((((((...)))))))......(((((.....................................................((.((((((....))))))..))...(((((((((.....(((((....)))))......))))))))).))))).......))))))))))...))))

Thermodynamic Ensemble Prediction

({,,.,((({{{((...,,,,{,,{(((((((((((.......))))...))))))),|({(.,{,|||{.{{{|||},.,}}}))),,},,}}|||}},...................................................{{.((((((....))))))..}}...(((((((((....,(((((....))))).,,...)))))))))..||||.......))))}})|||...,)))