Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0005800

Sequence Length

217 nt

GC Content

0.4194

GUUGAAUUUUUAGGAGAAGAAGGAACUGGCUUGGGACCCACAUUAGAGUUUUAUGCUCUGGUGGCAGCAGAAUUCCAGAGAACUGACUUGGGAGCUUGGCUUUGUGAUGAUAAUUUUCCAGAUGAUGAAUCUCGUCACUUUAAAUUUCCAGUUUUGCCCUUCCUCAAGAAUAUAUGGUUUUACAGCUGUGGAUCUCAAGCCAAGUGGUGAAGAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.30 kcal/mol

Ensemble Metrics

Free Energy: -55.10

Frequency: 0.0106

Diversity: 28.06

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((............((((((((((((.((.(((((((((.....)))))))))(((((.(((..(((.........((((((((...(((.......((..(((((...((.((((((...))))))))..)))))..)).....))).)))).))))......)))..)).).))))))).))))))))).)))..)))))))...

Thermodynamic Ensemble Prediction

.....(((((((............((((((((((((.((.(((((((((.....)))))))))(((((.{((..(((.........((((((((...(((.....,,((,.(((((...{(.((((({...)))))))}..)))))..}}.....))).)))).))))......)))..)).}.))))))).)))))))))},))..)))))))...