Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0021200

Sequence Length

250 nt

GC Content

0.3360

GUAUUAGAACUGAUAUGUACUCGUGAGUCAGGAGCAGUCUUUGAGGCUGGUGGUUUGAAUUGUGUGCUUACCUUCAUUCGUGACAGUGGACAUCUAGUUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUAUCAGUUGGUCAAUCUUUAAGUAACACUUUAACCACCAGCCUCACAUCAACUUCCAGUGAGAGUGACACAGGUCAGGAAGCAGAAUAUUCCUUAUAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.40 kcal/mol

Ensemble Metrics

Free Energy: -49.10

Frequency: 0.0000

Diversity: 57.56

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((............)))).((((....(((((...(((.((((((((((((((.((((((.(((.((((..(((....)))..)))).))).))))))........................................................((((.(.........).)))).....))))))))))))))......(((((........((((....))))))))).)))...)))))..))))

Thermodynamic Ensemble Prediction

(({({....((({{.{({{(((.{,..,|,{({|..,,...((((((((((((((,(({.,(((((((((...(({....}}}.,},|({{.....)))}......................................................,....}},.......)))))}})))})}))))))))))))))......|}}}}..},,))))|,|,,,.}))||{{{....,,,,}})|,....,)