Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0024000

Sequence Length

214 nt

GC Content

0.4766

GUCCUUCCUCUGAUGAUGAGAAUGAAGAGGAAUCAAAACCAGAAAAAGCACAACGCAAUCAUGGAGCAGCUUGGUGAAAAACAACUGUCCAGACAAGACAUCUGCUGCUGCAGGCUCCUCAAGUAGAAAAGGAAGCAGCAGUUCUGUGUGUAGCGUGGCCAGUAGCAGCGACAUCAGCUUGGGUUCGACCAAAACGGAACGGAGAUCAGAAAUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.50 kcal/mol

Ensemble Metrics

Free Energy: -52.70

Frequency: 0.0011

Diversity: 53.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((((((..............)))))))...............((.....))..((.((((.(((.(((........))))))))))))((((.....(((((((((.(((((((((..(((((..(.......)..)))))..)).)).).)))).))))))))).......)))).((((..........))))))).(........)

Thermodynamic Ensemble Prediction

.((((((((((..,.,,....,}..))))))}.......,.,.....((.....))..{{.((({,(((.(((........))))))))))},,.,{,..,,,((((((((.(((({((({..{({{{..|....,..)..))))),.)).}).,.)))).))))))))}...,,.,}|||{,{{{..,,,....,)))}))).(........)