Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0025400

Sequence Length

250 nt

GC Content

0.3920

GUAUUAGAACUGAUAUGUACUCGUGAGUCAGGAGCAGUCUUUGAGGCUGGUGGUUUGAAUUGUGUGCUUACCUUCAUUCGUGACAGUGGACAUCUAGUUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUUCCAGGAGCUCGUGUUAUCAGAGGCCUGGAUUGGAAAUGGCGAGAUCAGGAUGGCAGCCCACAGGGAGAAGGCACUGUCACAGGAGAACUACACAAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.10 kcal/mol

Ensemble Metrics

Free Energy: -51.18

Frequency: 0.0013

Diversity: 58.47

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((....))))))...(((.((...)).)))((((((...)))))).........((((((((.((.(((......(((((((((..(.(((.........................................................((((((..(((.((....))))).)))))).........((.(........).))..(((...)))))).).))))))))))))..)).)))))))).

Thermodynamic Ensemble Prediction

,{{{{,...{||||||,..{{{.{{..,)),}}}((((((...)))))).|,||||..{(((((((.,,.((({{.,,,(((((((((..{.(((...,.....................................................((((((..(((.{(....)}))).)))))).,,......{{.{........),}).,|||.,.}))))}.},)))))))))))),))),))))))}).