Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0026900

Sequence Length

254 nt

GC Content

0.4173

GUCCUUCCUCUGAUGAUGAGAAUGAAGAGGAAUCAAAACCAGAAAAAGAAGAUGAACCACAGGAAGAUGCUAAAGAAUUGCAACAAGGUCAACUGCAACUUGGCCUCUUGAUCCACCAAAGGAUGAGAAACAAGGGUGGAGACAUGUGAGAAUUAAACAGAUGGGGAAAAAUGCCAGUGGACAAACACACUACCUCUCAUUAUCUGGAUUCGAACUUUAUGGCACUGUAAAUGGAGUAUGUGAAGAUCAGCUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.60 kcal/mol

Ensemble Metrics

Free Energy: -50.69

Frequency: 0.0000

Diversity: 75.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..(((...((((((((((.(.((((((........((((.......((.(((.((.......(((........))).......))))).)).....)))))))))).)((((((...(.........)...))))))..(((.((.........)).)))((........))((((........))))...)))))))))).)))((((.(((((((..........)))))))...)))))))(.....)

Thermodynamic Ensemble Prediction

(({.{((((((..,.,,....}}..))))))}......{{{{,....,..{,,,..,,...||{{({.(({,,,{..{{{{{....,,,,...}}}},}))))),))))..((((((...{,........)...))))))..(((.((.........)).)))((........)){(((......,.))))..,))))})),))))).||,{{,((((((,..,{{....,,}}))).,}))))),)|.....)