Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0034300

Sequence Length

164 nt

GC Content

0.4146

GUGAUCCACCCUCCUUAGCCUUCCAAAGUGCUGGGAUUACAGGCAUUUGCCACUGUGCCAGUCCUGUGAUAGUGGUUUUCAUUUGAAGCGGAUGUUUUAUAUAAAGAUGUUCACAUCUUUAUUUCCUGUUUGAAUGUGCUAGGUUAUCCCAAAGAUAUUUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.90 kcal/mol

Ensemble Metrics

Free Energy: -40.23

Frequency: 0.0227

Diversity: 50.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((((....(((((((((...))).))))))((((((((.(((.((......)).))))))))))).))))...))))((...(((((((((((..(((((((((....)))))))))..(((((........)).)))........)))))))))))))

Thermodynamic Ensemble Prediction

((((.(({{...,({(((((({...})).))))))((((((((.(({.((,...,.)).})))))))))).))))...}}}}(({,,((((({{{{{|..(((((((((....)))))))))..|{{({..,,,,,,}},,||....,,..}})))))))))))