Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECTD1_0043700

Sequence Length

161 nt

GC Content

0.4410

CAAAGAGACUUUUAAAAAACCAUGGCAGAUGUGGACCCAGAUACAUUGCUGGAAUGGCUACAGAUGGGACAGGGAGAUGAAAGGGACAUGCAACUAAUAGCCCUUGAACAGCUAUGCAUGCUGCUUUUGAUGUCUGACAACGUGGAUCGUUGUUUUGAAAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.50 kcal/mol

Ensemble Metrics

Free Energy: -34.12

Frequency: 0.0028

Diversity: 34.96

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((................((.((.((..(((((..((((........)))).....)))))..))...))))((.((.(((((.(((((((.....((((.........)))))))))).).))))).)).)).(((((((.....))))))))))....

Thermodynamic Ensemble Prediction

{,,......,{{,,.....((,{{.((..(((({.,((({...,....)))}..,}}}}}}}..)),....,|((.((.(((((.(((((((.....((((.........)))))))))).).))))).)).))){((((((.....)))))))})),...