Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECW2_0000800

Sequence Length

228 nt

GC Content

0.4693

GUGGUGGAUGCCAGGCUGGUAUCUGUUUUUGAUGCAAGAGAACUGGAAUUGGUCAUCGCAGGCACAGCUGAAAUAGACCUAAGUGAUUGGAGAAACAACACAGAAUAUAGAGGAGUUUGUUACAGGCACAUCCAGCAUUCCCUAUGAAGGAUUUGCUUCACUCCGAGGGAGUAACGGCCCAAGAAGAUUCUGUGUGGAGAAAUGGGGGAAAAUCACUGCUCUUCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.90 kcal/mol

Ensemble Metrics

Free Energy: -57.84

Frequency: 0.0003

Diversity: 63.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((...))))))))((((((.......)))))).......((((((..(((......)))..)).))))........((......))(((((((((.....((.(((.((((((((((.((((..(((.....)))..)))).)))))...(((...)))))))))))))......)))))))))((.(((..(.((........)).)..)))))..

Thermodynamic Ensemble Prediction

.,,,,((((((({..,|}|}}|||{(((({....,,,}}},}||,,....(((({(..(((......)))..)).))))..,,,..|||......},(((((((((.....((.({{{((({{{((((.((((..(((.....)))..)))).))))).,{(((...)))))))))))))......))))))))){{,({,..(.((......,.)).)}})))))},