Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECW2_0007000

Sequence Length

350 nt

GC Content

0.5000

UGUAUUGUAUCCUAGGCAUUCUUUGUGGACCACAACUCCCGCACCACCACUUUCAUUGAUCCCCGGCUCCCACUUCAGAGCAGUAGACCCACAAGUGCGCUGGUUCAUCGGCAACACCUGACAAGGCAACGCAGCCACAGUGCGGGUGAGGUAGGAGAAGAUUCUCGACAUGCAGGACCACCAGUUCUUCCCAGGCCAUCCAGUACAUUCAAUACAGUCAGUAGGCCACAGUACCAGGACAUGGUUCCAGUGGCUUACAAUGACAAGAUUGUUGCAUUUCUACGUCAACCCAAUAUCUUUGAAAUUCUACAGGAGCGUCAACCUGAUCUUACCAGGAAUCACUCACUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-79.00 kcal/mol

Ensemble Metrics

Free Energy: -87.05

Frequency: 0.0000

Diversity: 89.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((.(((((.((........((((.((....((.((.((((..((((..............((((........))))..........((.(((.((((......))))..))).))....(((......)))..))))..)))).)).))((((....))))........)).))))........)).)))..)).)))))))((.......(((((((((((((...((((.....))))....)))))))))..))))....((((.(.(((((....................))))).).))))(((.(....((((.......))))...).)))....))

Thermodynamic Ensemble Prediction

(((((((.,,(((.((....,,,,((((.((.,..{,{(({(((,..{{{{......{.,,..{.((((........)))).,..},.....}}|||.|||||....||||}..,.,,}}....(((......)))...))))}))}).,}|,|((((....))))........)).)))}.,}.....}).)))..,}.)))))))({.......(((((((((((((.,.((((.....))))....)))))))))..)))).,,|||(({(,.,,.,...,.}},..|||.,,,,}|},...,,..,||{|{.{,,..((((.......))))...).}}}.,..))