Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECW2_0008400

Sequence Length

250 nt

GC Content

0.4600

CUUUGUAGGCAGCCAAUCCCAGAGAAGCAGACGGGAUGGCUAGUUCAGCCCGGGAGCACCUGCUUUUUGUGAGGCGUCGAAAUCCCCAGAUGCGGUACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUCAUUGAUCCCCGGCUCCCACUUCAGAGCAGUAGACCCACAAGUGCGCUGGUUCAUCGGCAACACCUGACAAGGCAACGCAGCCACAGUGCGGGUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.10 kcal/mol

Ensemble Metrics

Free Energy: -56.29

Frequency: 0.0011

Diversity: 49.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(((((((((.((((............))))))))).))..((((.((((((....)))...((((..(((((..........)))))..)))).............................................................))).))))....)).)))))(.....((((.((.(((.((((((((.((((......))))....).))).)))))))..)).))))..)

Thermodynamic Ensemble Prediction

(((((.{(({((((,,((((............))))))))).}}..((((.((((((....))}...{(((..(((((..........)))))..}})}.............................................................})).))))....)}.)))))(.....((((.{{.{{(.((((({{,.{{{{,....,||}}...||,,}}.}})))})..)),))))..)