Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HECW2_0011600

Sequence Length

250 nt

GC Content

0.3760

GGUCUCAGUACAGGGUCUCUGAGCCUGUUGCCCAAUCUGGAGUGCGAUGGUGCAGUCACAUCUCACUGCAGCCUUGAGCUCCUGGACUCAAGUGAUUCUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAGGUGUAUGAUUUUAAGGAAGAAUGCCAUGUUUCUUCUUGCUGCUGCCUAAGUCUCAUUUGACUGAUGGAUUUUAAAACCUUUGGGAUUAUAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.20 kcal/mol

Ensemble Metrics

Free Energy: -54.19

Frequency: 0.0003

Diversity: 58.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((((.((...)).)))).)))(((....(((((.(((.(.((((((........)))))).).))).)))))))).((((.((((((((...................................................(((.((..(((.........(((((((........))))))))))..))))).(((((.((((.....)))))))))..........)))))))).))))

Thermodynamic Ensemble Prediction

(({,.,.({(((((.((...)).))))},))|{...{,(((((.(((.({((((((........)))))).)}))).))))).)),|{({.{{{{{{({...................................................(({,{(,,(({........{(((((((........))))))))))..)})))..((((.,,,,.}}}},},||,||,.....,,.,,)))))))).))))