Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIAT1_0001000

Sequence Length

250 nt

GC Content

0.3320

AUGGCUAUAUGCAUCCAGUUCAUCCUCAUGUAGUUAGAAGACUUGCAUACCAACAUAAUCAGACCGUCUGCAGAAAUUCUCCUACAGUUGAAAUGUAACUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUAGCCUCAAGGAAUAGGUUCUCCUAGUGUCUAUCAUGCAGUUAUCGUCAUCUUUUUGGAGUUUUUUGCUUGGGGACUAUUGACAGCACCCACCUUGGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.50 kcal/mol

Ensemble Metrics

Free Energy: -38.04

Frequency: 0.0032

Diversity: 51.05

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((..(((((..(((((((..((((((((..((((...(((((.((...............)).)))))...)))).)))))..))).))).))))..................................................((((.(.(.((((........)))).).).)))).)))))..))))))((((......((((.....))))(((..((......))..))).....))))

Thermodynamic Ensemble Prediction

((((,((..(({{{..(((((((..{{{(((((..((((...(((((.((...............)).)))))...)))).)))))..})}.))).))))..................................................{{{(,{,(,((((...,,...}))},|.|.}}}}.}}}}}..}}}})}(({{.....||{|,...,,))}||{|,.|{......)).,))},}}..))))