Sequence Details

BLAST PRIMER
Symbol
hsa_HIAT1_0001900
Sequence Length
402 nt
GC Content
0.4229
CCUCAAGGAAUAGGUUCUCCUAGUGUCUAUCAUGCAGUUAUCGUCAUCUUUUUGGAGUUUUUUGCUUGGGGACUAUUGACAGCACCCACCUUGGUGGUAUUACAUGAAACCUUUCCUAAACAUACAUUUCUGAUGAACGGCUUAAUUCAAGGAGUAAAGGGUUUGUUGUCAUUCCUUAGUGCCCCGCUUAUUGGUGCUCUUUCUGAUGUUUGGGGCCGAAAAUCCUUCUUGCUGCUAACGGUGUUUUUCACAUGUGCCCCAAUUCCUUUAAUGAAGAUCAGCCCAUGGUGGUACUUUGCUGUUAUCUCUGUUUCUGGGGUUUUUGCAGUGACUUUUUCUGUGGUAUUUGCAUACGUAGCAGAUAUAACCCAAGAGCAUGAAAGAAGUAUGGCUUAUGGACUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-92.70 kcal/mol
Ensemble Metrics
Free Energy: -101.86
Frequency: 0.0000
Diversity: 150.21
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((((((((((....))))(((.....)))((((....(.(((......))).)....))))((((((((...(((.((((((....(((((((((..............((((((((((.((........(((.((((((((....((.(((.((((..((....))..))))..))).))....))))).)))..)))))))))))))))..............))))))))).))))))..)))...)).)))))))))))....)))....(((.(((((((.(((((((....((((((((.....((((......((((.........)))).((((((((.......))))))))..)))))))).))))..))))))).)).))))).)))
Thermodynamic Ensemble Prediction
{,({{(((({((((....)))},,{,|,..||.{(((,...{.(((,.....}}},|....}})),{(((({{...(((,((((((,.,.{((({((({..,,,..{{{{{,{({{{.,.,,,.,,.{{{,..,|||..,.....|},,}})}||..||||},||.}}}}}..,,,,,|}{|{||{..,{{{||.}},....}}}))).|||||||,{,,.........}|}}}}}}}.))))}}..})}...)},))))))})))}....})),)..{{{.((({(({.(((({{{.,,.{{{{{{{({,,,,({(({{...,((((.,,....,.)))),((((((((.......)))))))).,)))}})))})}))..))))))).)),,)))).)))
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