Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0005500
Sequence Length
264 nt
GC Content
0.4129
AAUGAAGUGUACCCUAACUAGCCGAGGAAGAACUAUGAACAUAAAGUCUGCAACAUGGAAGGUAUUGCACUGCACAGGCCACAUUCACGUAUAUGAUACCAACAGUAACCAACCUCAGUGUGGGUAUAAGAAACCACCUAUGACCUGCUUGGUGCUGAUUUGUGAACCCAUUCCUCACCCAUCAAAUAUUGAAAUUCCUUUAGAUAGCAAGACUUUCCUCAGUCGACACAGCCUGGAUAUGAAAUUUUCUUAUUGUGAUGAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.90 kcal/mol
Ensemble Metrics
Free Energy: -45.51
Frequency: 0.0000
Diversity: 97.43
Structure Visualization
Structure Prediction
MFE Structure Prediction
(..(((((.(...(((.(((...((((((...(((((................)))))..(((..(((...)))...)))...((((.((((.((((.....(((((.((((...(((.((((((..........))))))...))).)))))))))....((((.........))))..)))).)))))))).))))))))).)))..).)))))..)(..(((.(((((...(((..........)))..))))).)))..)
Thermodynamic Ensemble Prediction
(..{{(((.{...{{,.{{,...((((({...,,.,........,{{{{{{..,.|||{{{{,.||{||,||,.,|||}....{{{,.{{,,.,||{||,.,((((,,{{{{...{{{,(((({{........,,))}}})},.))).)))))))}},,..{{{{.........))}}..||||..,.,}}},.}})))))}}.},),.,,))))),,)|.,{({.(((({...{((.,......,}))}..})))).)))..)
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