Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0005600
Sequence Length
232 nt
GC Content
0.3922
AAUUACCGAAUUGAUGGGAUAUGAGCCAGAAGAACUUUUAGGCCGCUCAAUUUAUGAAUAUUAUCAUGCUUUGGACUCUGAUCAUCUGACCAAAACUCAUCAUGAUAUGUUUACUAAAGGACAAGUCACCACAGGACAGUACAGGAUGCUUGCCAAAAGAGGUGGAUAUGUCUGGGUUGAAACUCAAGCAACUGUCAUAUAUAACACCAAGAAUUCUCAACCACAGUGCAUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.40 kcal/mol
Ensemble Metrics
Free Energy: -42.75
Frequency: 0.0009
Diversity: 79.22
Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((((((...((.(.((((.((....(((((..(.((((..(((((......)))))..)))).)))))))).)))).)))...))))))).((((((((((((...((.(((((..((.............))..)))))))......))))))))))))(((((....))))).(((.((((...........................)))))))...
Thermodynamic Ensemble Prediction
..{{,,,.,,,(((((((...((.(.((((.{{....{|{{|,.|.|||{..(((((,,...,|||||..||||.,|}}}}}}.))}).))),,.}}))}))}||||||||||,{...((.((((||,((.,.,....,,...)).})))))))......)))))}}|||||((((({{,.,,||..,{.,{{{{.........,,....,.....}},}}},))),))}}.
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