Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0006000
Sequence Length
238 nt
GC Content
0.3992
AUAGCAAGACUUUCCUCAGUCGACACAGCCUGGAUAUGAAAUUUUCUUAUUGUGAUGAAAGAAUGUGUCCUUAAACCGGUUGAAUCUUCAGAUAUGAAAAUGACUCAGCUAUUCACCAAAGUUGAAUCAGAAGAUACAAGUAGCCUCUUUGACAAACUUAAGAAGGAACCUGAUGCUUUAACUUUGCUGGCCCCAGCCGCUGGAGACACAAUCAUAUCUUUAGAUUUUGGCAGCAACG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-43.10 kcal/mol
Ensemble Metrics
Free Energy: -48.02
Frequency: 0.0003
Diversity: 45.68
Structure Visualization
Structure Prediction
MFE Structure Prediction
...((..((((......))))((((((..((........(((......)))........))..))))))......(((...((((((..((((((((...((.((((((.......((((((((((.((..((..........(((.(((((.....))))).)))...))..)).))))))))))..(((....)))))).))).))...))))))))..)))))))))..))....
Thermodynamic Ensemble Prediction
...((..((((......))))((((((..({,,,({{..,,{.,,,..}}}...,,,..))..))))))......,,{||,((((((..((((((((...((.((((((.......(((((((((({(({.,,......,,..((({(({{,.....}}))).))).,,))},),.))))))))))..(((....))))))}})).))...))))))))..)))))),}}}.))....
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