Sequence Details

BLAST PRIMER
Symbol
hsa_HIF1A_0008100
Sequence Length
204 nt
GC Content
0.4412
AAUAUAAAUUUGGCAAUGUCUCCAUUACCCACCGCUGAAACGCCAAAGCCACUUCGAAGUAGUGCUGACCCUGCACUCAAUCAAGAAGUUGCAUUAAAAUUAGAACCAAAUCCAGAGUCACUGGAACUUUCUUUUACCAUGCCCCAGAUUCAGGAUCAGACACCUAGUCCUUCCGAUGGAAGCACUAGACAAAGUUCACCUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-36.60 kcal/mol
Ensemble Metrics
Free Energy: -40.27
Frequency: 0.0026
Diversity: 31.95
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.....((((((....((................))...))))))((.(((((.....(((((.......))))).......))))).)).................((((.(((((..(((..(.............)..)))))))).)))).......(((((.(((((...))))).))))).....)))(......)
Thermodynamic Ensemble Prediction
,,,.....{(((((....{{..,..........,..)}...)))))}((.(((((.....(((((.......)))))...,...))))).)).........,{,,....,((({(,,,..}|||}...,,,,........,..,,,}}}||{||,,..,....(((((.(((((...))))).))))).....}}},.,}}},}
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