Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0000100

Sequence Length

250 nt

GC Content

0.3600

GCUCAGCAGCACAUCACCACGGACCGCACUGGGAGCCACCGAAGGCAGCAGGCCUACAUCACUCCCACCAUGGCCCAGGCUCCGUACUCCUUCCCGCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUAAUUAAAAUUUGUAAACUCACAUAUGCAUAUUGUAUAUGUGUAGAAAUGUAAUCACACUUUGUCUUGGAAUUACAUUAAACUGUUUGAAAUCACUGUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.10 kcal/mol

Ensemble Metrics

Free Energy: -41.90

Frequency: 0.0021

Diversity: 29.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((.........(((((((((..((((((.......((((.....))))......)))))).....))...)).)))))...................................................................................((((((((((((...)))))))))).)).((((((((..((........))..))))))))...))).))))..........

Thermodynamic Ensemble Prediction

,.{,,{{{{.........(((((((((.,((((((.....,.((((.....)))).,....))))))...,})),..)).)))))...................................................................................((((((((((({...}))))))))).)).((((((((..((........))..))))))))...,}},.,}}......}}}.