Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0001800

Sequence Length

250 nt

GC Content

0.4480

GUAUGGCCUCACAUGUGCAAGUUUUCUCCCCUCACACCCUUCAAUCAAGUGCCUUCUGUAGUGUGAAGAAACUGAAAAUAGAGCCGAGUUCCAACUGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGGUCACUCUUCAGGGAGCUCAUCUGGAGCCAUCACCUACCGGCAGCAGCGGCCGGGCCCCCACUUCCAGCAGCAGCAGCCACUCAAUCUCAGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-40.60 kcal/mol

Ensemble Metrics

Free Energy: -44.09

Frequency: 0.0034

Diversity: 45.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((.((.((.(((..((((((((........(((((....(((.((..((((........))))..)))))........((.(((....))).))....................................................)).)))........))))))))))).))))))))).))((...(((.((.((.((.(((........))).)).)).)).)))..............))

Thermodynamic Ensemble Prediction

(((((((,((.{(,({(..{((({{((........{({{{....{{,{((..((((........))))..)))}}.....,..((.(((....))).))....................................................,,.}}}........}))))))}))).))))))))).))((..,(((.((.((.((.(((........))).)).)).)).)))...........}..))