Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0002100

Sequence Length

248 nt

GC Content

0.5766

CACUGUCUCCAAGCAAAGAAAAAACGUCAUCAGCUGUGUCACAGUCCACGACUCCCCCUACUCCGACUCCUCCAGCAACACCAGCCCCUACUCCGUGCAGCAGCGUGCUGGGCACAACAAUGCCAAUGCCUUUGACACCAAGGGGAGCCUGGAGAAUCACUGCACGGGGAACCCCCGAACCAUCAUCGUGCCACCCCUGAAAACCCAGGCCAGCGAAGUAUUGGUGGAGUGUGAUAGCCUGGUGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.00 kcal/mol

Ensemble Metrics

Free Energy: -68.54

Frequency: 0.0000

Diversity: 50.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((........)))........((((((...(((((((.(((((.(..................(((((((..(((.((......))..)))(((((...)))))((((......))))..(.((((((....)))))).)).))))))..........(((((...)))))........((((......((((......))))...)))).....).))))).)))))))..))))))....

Thermodynamic Ensemble Prediction

.....(((........)))......{.(((((({{.{((((((.(((((.,.........,...{,.{.(((((((..,.,.{({..,,.|,..}}}{{|{|,.,}))))((((......))))..{.((((((....)))))).}),})))))..,,...,..(((((...))))}....,...{{{(,,....((((......))))...))),.},..},))))).)))))))),))))))...,