Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0002900

Sequence Length

327 nt

GC Content

0.6239

CACCACCUCCUCCCGGAAGAGUAAGCAGCACCAGUCAUCUGUGAGAAAUGUCUCCACCUGUGAGGUGUCCUCCUCUCAGGCCAUCAGCUCCCCACAGCGAUCCAAGCGUGUCAAGGAGAACACACCUCCCCGCUGUGCCAUGGUGCACAGUAGCCCGGCCUGCAGCACCUCGGUCACCUGUGGGUGGGGCGACGUGGCCUCCAGCACCACCCGGGAACGGCAGCGGCAGACAAUUGUCAUUCCCGACACUCCCAGCCCCACGGUCAGCGUCAUCACCAUCAGCAGUGACACGGACGAGGAGGAGGAACAGAAACACGCCCCCACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-103.30 kcal/mol

Ensemble Metrics

Free Energy: -108.47

Frequency: 0.0002

Diversity: 93.22

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((((................(((....))).((((....))))..((((.((((......)))).))))..(((.(((......)))))).....(((((((.((((.......))))..(((((((......))))))).((((.((((((((.((....))...)))))))).))))(((((((((....((......((((((.(((((..(....)..))))).)))))).........)).....))))).))))..............)))))))..)).))))))))......................

Thermodynamic Ensemble Prediction

.....(((((((((({..(({.......{{,{{{....}}|||{{,....}))),.|{,{.(((({{{.{{|||,.||,|{.{((.(((......))))}}....}|,||,,.,||||...}}}})))}.,(((((((,..,,.||}}}||.((((.((((((((.((....))...)))))))).)))){{{(((({{....{{.,....((((((.(((((..{....)..))))).)))))).........))...,.)))},|}|||.,,.,........})))),)}}.)).)))))))).....................,