Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0003400

Sequence Length

330 nt

GC Content

0.5879

GCUCCCUCCUCUACCAGUGCCACUAUUUCCUUAGCCAAUCCCGAAGUCUCCAUACUAAACUACCCAUCUACACUCUACCAGCCCUCAGCGGCAUCCAUGGCUGCAGUGGCCCAGCGGAGCAUGCCCCUGCAGACAGGAACAGCCCAGAUUUGUGCCCGGCCUGACCCGUUCCAGCAAGCUCUCAUCGUGUGUCCCCCCGGCUUCCAAGGCUUGCAGGCCUCUCCCUCUAAGCACGCUGGCUACUCGGUGCGAAUGGAAAAUGCAGUUCCCAUCGUCACUCAAGCCCCAGGAGCUCAGCCUCUUCAGAUCCAACCAGGUCUGCUUGCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-74.80 kcal/mol

Ensemble Metrics

Free Energy: -81.03

Frequency: 0.0000

Diversity: 89.98

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...((((.((.(((.(((............(((((.......(((......)))........................(((......))).....)))))))).)))...)).))))...))(((((....))))....((.((....)).))((((...((((((.................)).).)))...)))).......(((..((((((((.....((((((.(.(((((((.((.(((((((..((((.......))))..)))).......)))..)).))).)))).)))).))).......))))))))..)))..)

Thermodynamic Ensemble Prediction

((...((((.{{...,{,(({,({.......|(((({.....,.(((......,},........................(((......))).....}))))),)})))}..}}.}}})...)){((((....))))..,,{,.,,...,||,||{{((...({{{{{....,{,..,,,,,...}).).)}}...}}))}......(((..((((((((.....((((((.,.(((((({.((.(((((((.,((({.......))}),,))),}},,...}}}..}),))).)))).}))).))).......))))))))..)))..)