Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0004700

Sequence Length

285 nt

GC Content

0.5474

CGUCAAAUCAUGUUUCCAGAACAUGGAGAUCUGCAAGCGUCGGGUGAAUAUGUAUGACACGGUGAACCAGAGCAAAACCCCUUUCAUCACGCACGUGGCCCCCAGCACGUCCACCAACCUGACCAUGACCUUUAACAACCAGCUGACCACUGUCCACAACCAGGCUUGCAGGCCUCUCCCUCUAAGCACGCUGGCUACUCGGUGCGAAUGGAAAAUGCAGUUCCCAUCGUCACUCAAGCCCCAGGAGCUCAGCCUCUUCAGAUCCAACCAGGUCUGCUUGCCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.70 kcal/mol

Ensemble Metrics

Free Energy: -71.36

Frequency: 0.0000

Diversity: 51.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....(((((((...)))))))(((.((((((((((((((((......((((((...(((.............)))....)))).))(.(((((........))))).)....)))))))..........................(((........)))))))))))).))).........).)))(((((.....(((((((..((((.......))))..))).))))........(((((......)))))((((((......))))))...).))))

Thermodynamic Ensemble Prediction

(((,....(((((((...)))))))((({((((((((((((((((,....,{,...,.,.(((((,..,{,{......,.}}}))))),,{.(((((........))))).,....))))))).....................|....{{|........}})))))))))).,))}}.......}.)))(((({.....(((((((.,((((.......)))),,))).))))..||....{((((,.....))))}((((((......))))))...),))))