Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_HIPK2_0012100

Sequence Length

250 nt

GC Content

0.3480

UUCUAGGCAUCACAUCCAACUCAACAGUGUCCAUGGGAAAAAGAGCAUCUCUUUAAAGCAAGAAAACCUUUUCCAGAAGCUUCCUGCAGACCUCCCUUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUCUUACAGCUCUUCUCACAGCAGUCCUCAUUGGAAGCUCAAGGCCUAACAUGAAAAUGCAACUCAGCAAAUGUUAUUCCCUGGAAGGCCAAAAUAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-26.20 kcal/mol

Ensemble Metrics

Free Energy: -30.71

Frequency: 0.0007

Diversity: 61.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((..(((.............)))((((.(((((((((((...))))))...(((.(((...((((....)))).))).))).......................................................................(((........)))..(((.....))).(((...))).((((((.....(((......))).)))))))))))))))..)))..........

Thermodynamic Ensemble Prediction

,,.,,(((....,.....,......,}}}{{{{,((((,((((((...))))))...{{{.(({...{{{|....|}||,|||,}|},{......,,.,...........................................................(((........})).,|,,.....))),))}...||},{|{({{.....(((......))}.,}|}||||}}}})|,..})),.,,,.....