Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0001000

Sequence Length

225 nt

GC Content

0.4400

GCUCCCUACACACCUUUUCUCACUGAAUUGAUGUACCAGAAUCUAAAGGUGCUGAUUGACCCUGUUUCUGUUCAGGACAAGGACACACUCAGCAUUCACUACCUCAUGCUGCCCCGUGUUCGAGAAGAAUUGAUUGACAAGAAAACAGAGAGUGCAGUAUCUCAGAUGCAGUCUGUGAUUGAACUUGGAAGAGUGAUCAGAGACCGAAAAACUAUUCCCAUAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.20 kcal/mol

Ensemble Metrics

Free Energy: -47.42

Frequency: 0.0002

Diversity: 47.30

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...)((.(((((((((.....(((...........))).....))))))).))..(((((((((((((..((((..(((((((((...((((((..........))))))....))))))........))).))))..)).)))))).).)).))(((((...))))).((((.(((((..((((....))))))))).)))).(((......)))......))

Thermodynamic Ensemble Prediction

(...,,{.,(((,(,,({{.....}}}..}.}}}..,,|.{{{{..{||||(((.,,..{,(((((((({,((((..{,,((((((...((((((..........))))))....))))))........))).}}))}.})))))))).}.}}.)))}}})}.}))).}.((((.(((((..((((....))))))))).)))).{,,......,}}......})