Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_IARS_0004800

Sequence Length

290 nt

GC Content

0.4276

GGACCAUUGUUGUGGAAGGCCAUGAAUUGCACGAUGAAGACAUCCGCCUCAUGUACACCUUUGAUCAGGCCACAGGUGGGACUGCGCAAUUUGAAGCACACUCAGAUGCUCAGUGCAAUCUGGUUCCAACUGAUGAAAUCACAGUGUACUAUAAAGCAAAGUCUGAAGGAACAUAUCUGAAUAGUGUUAUUGAAAGCCACACAGAGUUCAUAUUUACCACCAUAAAGGCUCCCUUGAAACCAUAUCCAGUUUCUCCAUCGGAUAAAGUCCUUAUUCAAGAAAAAACACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.90 kcal/mol

Ensemble Metrics

Free Energy: -64.80

Frequency: 0.0001

Diversity: 73.17

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.((((.((((..(..(((((...((..((((....)))).)).)))))..).(((......)))...(((((.(.((((.(((.(((((.......)))))))).)))).).)))))(((((.((((.((....))))))((........))..........))))).....(((((..(((...((.....)).)))..)))))......)))).)))).)).)))((.(((((........)))))......((((...))))..................))

Thermodynamic Ensemble Prediction

(((((.((((.((((.,({{{{(((,,.((,,{(((..,.}}}}.}|.|}|}|{,{{{.{{{.{{{{{|,..(((((.(.((((.((,,(((((.,....,)))))))).)))).).))))),,.,,.,|||}|,,,,.,,,,))}}}}......},...,}}},..}}|,}...,,{{,{{.|{{{...|,...,,}}.})},,))))}..,,,.)))).)))).)).)))((.(((((........)))))......((((,..}},},,,,,,............))